Blueberry Lemon Sourdough Muffins

Featured in: Breads & Sweet Bakes

These blueberry lemon sourdough muffins combine the tangy depth of sourdough discard with fresh blueberries and bright lemon zest. The batter is tender and moist, enriched with eggs, milk, and oil, then crowned with a buttery streusel that adds a delightful crunch. Baking yields golden tops and a soft crumb, ideal for breakfast or a snack. Variations include swapping berries or boosting lemon flavor with juice, and the muffins freeze well for convenience.

Updated on Tue, 24 Feb 2026 12:19:00 GMT
Blueberry Lemon Sourdough Muffins with Streusel, golden and fluffy, filled with juicy blueberries and topped with a crunchy cinnamon streusel. Pin It
Blueberry Lemon Sourdough Muffins with Streusel, golden and fluffy, filled with juicy blueberries and topped with a crunchy cinnamon streusel. | hyperflavors.com

My sourdough starter had been neglected for weeks, sitting in the back of my fridge like an abandoned houseplant, when I decided it was time to stop feeling guilty and actually use the discard for something worthwhile. That's when these blueberry lemon muffins happened—a way to transform what would've been poured down the drain into something that filled my kitchen with the kind of smell that makes people ask what you're baking before they even walk through the door. The tanginess from the sourdough plays perfectly against bright lemon and juicy berries, and there's this streusel topping that gets crispy and golden in a way that seems almost unfair. These muffins became my weekend ritual, the kind of thing I'd make on lazy Saturday mornings when I wanted breakfast to feel special without much effort.

I brought a batch to my neighbor one morning, still warm from the cooling rack, and she literally closed her eyes on the first bite—the kind of reaction that makes you feel like you've done something right. She asked for the recipe immediately, and when I told her the secret ingredient was sourdough discard, she laughed and said she'd been doing the same thing I was, tossing it out every week. Now we trade batches like we're in some kind of baking club, and these muffins are somehow always part of the rotation.

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Ingredients

  • All-purpose flour (2 cups): The foundation of structure; don't sift it unless your flour is compacted, just spoon and level it.
  • Granulated sugar (1 cup): Sweetness with a straightforward hand; this amount balances the tang beautifully without overdoing it.
  • Baking soda (1/2 teaspoon): This reacts with the acidic sourdough, so don't skip it or your muffins will be dense.
  • Baking powder (2 teaspoons): Your secondary leavening agent; use fresh powder that's less than six months old if you can.
  • Salt (1/2 teaspoon): A pinch that awakens all the other flavors and isn't optional.
  • Lemon zest (from 1 large lemon): The microplane is your friend here; you want those tiny, fragrant pieces throughout.
  • Sourdough discard (1 cup): Use the unfed kind straight from the jar; it's the sour backbone that makes these sing.
  • Whole milk (1/2 cup): Room temperature matters because it incorporates more smoothly with the other wet ingredients.
  • Vegetable oil or melted butter (1/3 cup): Oil keeps them moist; butter adds richness—either works, so choose what you prefer.
  • Large eggs (2): Also room temperature; cold eggs can create lumps in your batter.
  • Pure vanilla extract (1 teaspoon): The real stuff, because imitation just disappears into the background.
  • Fresh or frozen blueberries (1 cup): Don't thaw frozen ones or they'll bleed into the batter; the chill helps them stay suspended.
  • All-purpose flour for streusel (1/3 cup): Keeps the topping from being too dense and oily.
  • Granulated sugar for streusel (1/4 cup): This browns beautifully and adds that textural contrast.
  • Cold unsalted butter for streusel (1/4 cup): The cold part is crucial; warm butter won't create those desirable crumbs.
  • Ground cinnamon (1/2 teaspoon): A whisper of warmth that doesn't compete with the lemon.
  • Salt for streusel (pinch): Deepens the flavor of everything on top.

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Instructions

Heat your oven and prep your pan:
Get the oven to 375°F and line your muffin tin with paper liners or give it a quick grease. Paper liners are your friend here because they peel away cleanly and make cleanup effortless.
Combine your dry ingredients:
In a medium bowl, whisk together flour, sugar, baking soda, baking powder, salt, and that bright lemon zest until everything is evenly distributed. This step prevents baking soda clumps from sneaking into your muffins.
Mix the wet ingredients until silky:
In a large bowl, whisk the sourdough discard, room-temperature milk, oil, eggs, and vanilla together until the mixture is smooth and cohesive. You'll notice it smells pleasantly tangy already, which is exactly what you want.
Gently fold wet into dry:
Pour the wet ingredients into the dry ingredients and stir with a rubber spatula until just barely combined—you're looking for some small pockets of flour still visible. Overmixing develops gluten, which makes muffins tough instead of tender, so resist the urge to make it perfectly smooth.
Fold in your blueberries with care:
Add the cold blueberries and fold them through gently so they're distributed but not crushed. If you're using frozen berries, don't thaw them first; they'll keep their shape better and won't stain the batter.
Fill your muffin cups evenly:
Divide the batter among the twelve cups, filling each about three-quarters full so they have room to rise without overflowing. A small ice cream scoop makes this task foolproof.
Make your streusel topping:
In a small bowl, mix flour, sugar, cinnamon, and salt, then cut in the cold diced butter using a fork or your fingertips until the mixture looks like coarse breadcrumbs. This happens faster than you'd think, so don't overwork it or you'll end up with a paste instead of crumbs.
Crown each muffin:
Sprinkle the streusel generously and evenly over the top of each unbaked muffin, pressing it down ever so slightly so it stays put.
Bake until golden:
Slide the tin into the oven for 22 to 25 minutes; you'll know they're done when a toothpick inserted in the center comes out clean and the tops are a warm golden brown. The kitchen will smell absolutely incredible by this point.
Cool with patience:
Let them rest in the pan for 5 minutes so they set slightly, then turn them out onto a wire rack to cool completely. This keeps the bottoms from getting soggy.
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| hyperflavors.com

There was a moment, maybe a month into making these regularly, when my daughter came home from school and the first thing she said wasn't hi or how was your day—it was that the house smelled like my muffins. That's when I realized these had stopped being just breakfast and become part of what home smells like to her.

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The Magic of Sourdough Discard

Using your sourdough discard isn't just practical; it's a flavor multiplier that costs you nothing but a jar you were going to throw out anyway. The fermentation adds a subtle complexity that makes people ask if there's something special in your recipe, and when you tell them it's sourdough starter, they always seem impressed. It's honestly one of those kitchen secrets that feels more sophisticated than it actually is.

Lemon Brightness Without Harshness

Lemon zest is your best friend here because it gives you all the fragrance and oil without the juice that could make the crumb too wet. The zest distributes evenly throughout the batter, so every bite gets that brightness without feeling acidic. If you ever want to push the lemon flavor further, you can add a tablespoon of fresh lemon juice to the wet ingredients, but start conservatively.

Streusel Secrets and Storage

A great streusel is about ratios and cold butter; when those things align, you get something that stays crunchy even the next day, which is rare and wonderful. Make it right before you fill the muffin cups so the butter stays cold, and if your kitchen is warm, chill your streusel in the freezer for a few minutes. These muffins keep beautifully in an airtight container at room temperature for a couple of days, and they freeze wonderfully for up to two months if you want to get ahead.

  • Wrap cooled muffins individually in plastic wrap before storing to keep them fresh and prevent them from drying out.
  • You can thaw frozen muffins at room temperature or pop them in the microwave for 20 seconds if you're in a hurry.
  • Stale muffins make excellent breadcrumbs or can be crumbled into yogurt parfaits.
Moist, tangy muffins bursting with fresh blueberries and zesty lemon, crowned with a buttery streusel topping for a delightful breakfast treat. Pin It
Moist, tangy muffins bursting with fresh blueberries and zesty lemon, crowned with a buttery streusel topping for a delightful breakfast treat. | hyperflavors.com

These muffins remind me why I keep a sourdough starter in the first place, and why a little bit of tangy ferment can transform something as simple as a muffin into something worth remembering. Make them once and you'll find yourself making them again.

Recipe Questions & Answers

What makes sourdough discard important in these muffins?

Sourdough discard adds a subtle tanginess and moist texture, enhancing the flavor complexity without the need for additional leavening agents.

Can I substitute frozen blueberries in this preparation?

Yes, frozen blueberries can be used directly without thawing to prevent color bleeding and maintain batter consistency.

How does the streusel topping affect the final texture?

The streusel introduces a buttery, crunchy contrast to the soft muffin crumb, adding both texture and a hint of cinnamon spice.

Is it necessary to use room temperature eggs and milk?

Using ingredients at room temperature helps achieve a smoother batter and encourages even baking with a tender crumb.

What are suitable berry alternatives to blueberries?

Raspberries or blackberries work well as substitutes, providing a slightly different tartness and color variation.

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Blueberry Lemon Sourdough Muffins

Moist, tangy muffins bursting with fresh blueberries and lemon zest, topped with a crunchy streusel for extra flavor.

Time to Prep
20 min
Time to Cook
25 min
Total Duration
45 min
Created by Aria Brooks


Skill Level Medium

Cuisine Type American

Makes 12 Serving Size

Dietary Notes Vegetarian-Friendly

What You'll Need

Muffins

01 2 cups all-purpose flour
02 1 cup granulated sugar
03 1/2 teaspoon baking soda
04 2 teaspoons baking powder
05 1/2 teaspoon salt
06 Zest of 1 large lemon
07 1 cup sourdough discard, unfed
08 1/2 cup whole milk, room temperature
09 1/3 cup vegetable oil or melted butter
10 2 large eggs, room temperature
11 1 teaspoon pure vanilla extract
12 1 cup fresh or frozen blueberries, unthawed if frozen

Streusel Topping

01 1/3 cup all-purpose flour
02 1/4 cup granulated sugar
03 1/4 cup cold unsalted butter, diced
04 1/2 teaspoon ground cinnamon
05 Pinch of salt

How to Make It

Step 01

Prepare Oven and Muffin Tin: Preheat oven to 375°F. Line a 12-cup muffin tin with paper liners or grease thoroughly.

Step 02

Mix Dry Ingredients: In a medium bowl, combine flour, sugar, baking soda, baking powder, salt, and lemon zest. Set aside.

Step 03

Combine Wet Ingredients: In a large bowl, whisk together sourdough discard, milk, oil or melted butter, eggs, and vanilla until smooth.

Step 04

Incorporate Dry Mixture: Add dry ingredients to wet ingredients and stir gently until just combined, being careful not to overmix.

Step 05

Fold in Blueberries: Carefully fold blueberries into the batter using a rubber spatula.

Step 06

Fill Muffin Cups: Divide batter evenly among prepared muffin cups, filling each approximately 3/4 full.

Step 07

Prepare Streusel Topping: In a small bowl, mix flour, sugar, cinnamon, and salt. Cut in cold butter using a fork or fingertips until mixture resembles coarse crumbs.

Step 08

Apply Streusel: Sprinkle streusel mixture evenly over each muffin.

Step 09

Bake Muffins: Bake for 22-25 minutes until a toothpick inserted into the center comes out clean and tops are golden brown.

Step 10

Cool Muffins: Allow muffins to cool in pan for 5 minutes, then transfer to a wire rack to cool completely.

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What You Need

  • 12-cup muffin tin
  • Medium mixing bowl
  • Large mixing bowl
  • Whisk
  • Measuring cups and spoons
  • Microplane or zester
  • Rubber spatula
  • Wire cooling rack

Allergy Info

Be sure to check every ingredient for possible allergens. If unsure, reach out to a health specialist.
  • Contains wheat and gluten
  • Contains eggs
  • Contains dairy including milk and butter
  • May contain traces of tree nuts from shared processing facilities

Nutritional Breakdown (per serving)

Nutritional details are for informational purposes and shouldn't replace advice from your doctor.
  • Caloric Value: 230
  • Fats: 9 g
  • Carbohydrates: 34 g
  • Proteins: 4 g

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